PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma58g00740.1
Common NameZOSMA_58G00740
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 485aa    MW: 52555.8 Da    PI: 7.9651
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma58g00740.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.7e-08319366455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i ++++ L++l+P +    +k   Ka  L + ++Y++sLq
  Zosma58g00740.1 319 SHSLAERVRREKISERMNFLQDLVPGC----NKVTGKAVRLDEIINYVQSLQ 366
                      8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.09E-9313370No hitNo description
SuperFamilySSF474593.4E-16313384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.786315365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-15315379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-5319366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-7321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MDSNGRFLTG SGANLRQASE MNCGTTEHVM QPCFLNLGYW DQSMDQSSLF GSGLTSMVSS  60
PSTAPATAQE SVVLGEVIGR LGSICNSGEI SPQSHSHSPT NSCYVTPLNS PKGLNLPAIS  120
ENLAIPPPPS LPALRMTYLP PFVSDPSFTQ RLPRFSSLGN GGGSQLGIEN IPHIGLIPAR  180
SPTISDAQFG ISRDESTSVS DRPIGGGTCS GDGSNSRKRK AVQKGKTNDF PISSMTMISD  240
TSCKPRNSIQ METMDSDSKR VKCSEAMGRR STKNELNKPK VEPSSSRGGG GGDQKEEKED  300
KSKQDYIHVR ARRGQATDSH SLAERVRREK ISERMNFLQD LVPGCNKVTG KAVRLDEIIN  360
YVQSLQRQVE FLSMKLATVN PWTEFNMESH ACKDIYESHR RGSVAFPSEV STVNADPAFP  420
FVLHTQMQSS TLRKSGGMQL PTFNGFPNFT SPSTQQQVSS DFYDNDLQNI VQMGGNIGPT  480
NQLN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007034153.15e-98Basic helix-loop-helix DNA-binding superfamily protein isoform 1
TrEMBLA0A0K9NX730.0A0A0K9NX73_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125472835
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.15e-59bHLH family protein